I do understand what you're saying, and I suppose you have a point, but look at it from my perspective:
First of all, I'm not all that serious about this game. I play mmorpgs for the most part. That's where the majority of my attention and interest lie. I picked this game up as something to play while waiting for Star Wars Galaxies to come out after discovering that Shadowbane is still a beta quality game, and will probably remain so for the forseeable future. Mmorpgs are my hobby. Galactic Civilizations, as any single player game, is "just a game".
Whenever I buy a game like this, I'm just looking for something I can instal and start playing. If there's a patch available, fine. I'll download it from Gamespy or the publisher's site, instal it, and I'm gtg. Simple. No fuss, no muss.
Anyway, I bought this game last night, and this morning I discover from the daily episode of Gamespy sent to my email that there's a patch available. The actual message read, "This patch brings the game to version 1.03, and fixes numerous bugs and makes some gameplay adjustements. It's available through the auto-updater."
I figure, great. Auto updater. Nothing could be less fuss, less muss, right? Heh, wrong. At that point, I knew nothing about Stardock. Half an hour later, I was so frustrated, I was about ready to return the game. All I wanted was a simple game, easy to instal and patch (like every other non-mmorpg game I've ever purchased), and I get....Stardock.
Again, at this point, I don't know much at all about Stardock. I have no idea that the patch will be released for "normal" download in the future. All I know is I'm jumping through proverbial hoops for a patch that's available, but frustratingly difficult to actually access.
Hell, signing up for a mmorpg, including site registration, accout setup and verification, connection to the servers, character creation, and ultimately login, are less of a pain in the ass.
Don't get me wrong, I appreciate both the game and the patch, and I have no problem with the concept of the Stardock thingee, but good lord, could they have made it even slightly less user friendly?
Other than that, I love the game! From my admittedly limited experience so far, it's like Civ 3 without the simplistic predictability.

The only thing I'm really missing is a toggle to show/hide anomalies on the mini-map.